Nanobiology Notes

It ain't what you don't know that gets you into trouble. It's what you know for sure that just ain't so.

-- Mark Twain

So far, most of the posts in this blog have been focused on building a 'bottom-up' understanding of how the brain works - from how DNA works up to how individual neurons work. Lots of good science to base all of this stuff on. It is difficult to go further 'up the stack' in this way, however. How do neurons work together to do useful things? How are small-scale networks of neurons structured and how do the neurons interact in order for us to do simple things like rhythmically tap a finger?

Are we there yet?
Every decade or two the scientific community gets wildly optimistic that we will be able to fully understand how cognition works and be able to replicate the process in some non-biological system. It's been named many things over the years - cybernetics, artificial intelligence, computational intelligence, cognitive computing (see http://en.wikipedia.org/wiki/Artificial_intelligence for a nice overview). And yet, with all of the money tha…

Perkinjes and Granules and Schwanns, oh my...

It's tempting to oversimplify things. Like neurons. It would be nice if there were one type of neuron, and all you needed to know about how neurons work could be clearly labelled on a diagram of that one type of neuron. Well, nature LOVES to specialize. So, before getting deeper into how neurons work, I thought it would be good to take a step back and get some vocabulary in place...The BasicsFrom University of Washington's 'Neuroscience for kids':Neurons come in many different shapes and sizes. Some of the smallest neurons have cell bodies that are only 4 microns wide. Some of the biggest neurons have cell bodies that are 100 microns wide. Neurons are similar to other cells in the body because: Neurons are surrounded by a cell membrane. Neurons have a nucleus that contains genes. Neurons contain cytoplasm, mitochondria and other "organelles". Neurons carry out basic cellular processes such as protein synthesis and energy production. However, neurons diff…

Neurotransmitters - molecular messages

You often hear about neurotransmitters in the news and in science magazines in a kind of off-hand way that assumes everyone must surely know what these things are. But, um, what are they, exactly?

From Sandra Ackerman's book "Discovering the Brain": To be recognized as a neurotransmitter, a chemical compound must satisfy six conditions: It must be

synthesized in the neuron, stored there, released in sufficient quantity to bring about some physical effect; when administered experimentally, the compound must demonstrate the same effect that it brings about in living tissue; there must be receptor sites specific to this compound on the postsynaptic membrane, as well as a means for shutting off its effect, either by causing its swift decomposition or by reuptake, absorbing it back into the cell.

OK, well, what about hormones? They're chemical messengers too - how are hormones different from neurotransmitters? A hormone, by definition, is a compound produced by an endocrine…

Beta Rhythm (Music of the Mind)

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